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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs2105027 chr6:46930537 C/G 1.6E-5 405 15.13 16.55 12.5 KM Plot
LGG rs2116984 chr6:27932762 C/A 3.69E-5 407 15.2 15.57 14.8 KM Plot
LGG rs2139747 chr3:126387875 A/G 0.000117 407 15.25 14.73 23.93 KM Plot
LGG rs213986 chr7:117259946 A/G 0.000169 407 8.55 14.8 16.32 KM Plot
LGG rs2168028 chr12:69715913 C/T 0.000173 405 14.95 14.85 18.2 KM Plot
LGG rs2180562 chr10:33438567 C/T 0 407 15.03 18.4 5.93 KM Plot
LGG rs2184887 chr1:219167838 A/G 4.27E-5 407 14.43 18.17 17.73 KM Plot
LGG rs2185512 chr10:99317388 A/G 9.0E-7 407 17.07 11.12 15.72 KM Plot
LGG rs2187314 chr21:45553430 A/C 8.75E-14 403 3.15 13.57 15.6 KM Plot
LGG rs2190249 chr7:7574438 G/A 1.11E-16 406 2.23 15.73 15.33 KM Plot
LGG rs219316 chr14:60438093 C/T 4.04E-5 404 12.17 17.83 14.77 KM Plot
LGG rs219317 chr14:60438346 C/T 4.19E-5 403 12.17 17.83 14.75 KM Plot
LGG rs2194296 chr16:76267512 A/T 1.59E-8 407 6.63 15.93 15.2 KM Plot
LGG rs2208027 chr20:3328942 C/A 1.02E-7 406 15.97 11.55 6.83 KM Plot
LGG rs2230394 chr10:33217110 A/G 1.59E-5 407 11.43 16.77 15.17 KM Plot